Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865614.1_cds_XP_016432443.1_28689
CDS Infomation

[gene=LOC107759087] [db_xref=GeneID:107759087] [protein=cell division cycle protein 48 homolog] [protein_id=XP_016432443.1] [location=21319..23754] [gbkey=CDS]
Sequence

ATGAAAGGTGAAAACAAAAAACAATCCTTTGAATCCAAAGAAACCAAAAAAGACTATACC
ACAGCAATTCTTGAAAGAAAAAAAGCACCAAATAGACTCATAGTTGATGAATCAACAAAA
GATGAAAACTCCATTGTTTTTCTCAATCCAGAAACTATGGAAAAACTTCAATTATTTCGC
GGCGATACTGTTTTAATCAAAGGAAAAAGAAAAAGAGATACAATAAGTACAGCAGAAGTT
GATGAAACATGTGAAGAATCAAAGATTCGTATGAACAAAGTTGTTAGAAACAACCTACGA
ATCCGTTTAGGTGATATTGCTTCTGTCCATCTTTGTAGTAATATTCAATATGGTAAACGT
GTGCATGTTCTTCCTATTGATGATACTATTGAAGGTTTAACAGGTGATCTATTTGAGGTT
TATTTAAAACCTTATTTTACTGATTCTTATCGTCCGTTAAGAAAAGGTGATATTTTTAAT
GTTAGAGGTGGGATGAGGAGTGTGGAATTTAAGGTTGTGGAAACTGATCCACCTGATTAT
TGTATTGTTGCTCCTGATACGGAGATTTTTATCGATGGTGATCCGATTAGAAGGGAAGAC
GAGGAACGGGCATTAGACGAGATTGGATACGATGATGTTGGTGGTGTTAGGAAACAAATG
GCGCAAATTCGCGAGTTGGTTGAGTTGCCATTGAGACATCCACAGCTTTTTAAGTGTATT
GGTGTGAAAACCCCTAAAGGGATTCTTTTGTATGGACCACCTGGTTCAGGGAAAACGACT
ATAGCACGAGCTGTGGCTAATGAAACTGGTGCATTTTTCTTGGTTATTAATGGACCTGAG
ATTATGTCCAAGATGGCTGGTGAGAGTGAGGCTAATTTGAGGAACGCTTTTGTGGAAGCT
GAAAAGAATGCACCTTCTATAATTTTCATTGATGAGGTTGATTCTATCGCGCCTAATAGG
GAAAAGACTAATGGAGAGGTGGAAAGGAGGATTGTTTCGCAGCTTTTGACTTTAATGGAT
GGACTTAAGTCGCGTGCACATGTTGTCGTTATGGCTGCAACGAATAGGCCTAATAGCATT
GATCCTGCACTTAGAAGGTTTGGGAGATTCGACAGGGAAATTGATATTGGCGTTCCTGAT
GAGGTTGGTCGCCTTGAGATTCTTCGTGTACACACGAAGAACATGAAGTTGGACGAGGAT
GTTGATTTGGAAATGGTTGCAAAGGATACACATGGTCATGTTGGTGCTGATTTAGCAGCA
TTGACTACTGAGGCCGCGCTTCAATGTATTAGGGAGAAGATGGATGTGATTGACATGGAA
GACGATACGATTGATGCAGAGATACTCAATTCCATGGCAGTTAATAACGAACATTTCAAG
GCTGCTTTAGGAACAACGAATCCCTCTTCTCTTCGTGAGACAGTCGTTGAAGTACCAAAC
GTTTCGTGGGATGATATTGGAGGGCTCGAGACTGTTAAACGCGAGCTTCAAGAGACAGTA
CAGTATCCAGTGGAACATCCTGAATTGTTTGAGAAATTCGGGATGTCTGCTTCAAAGGGT
GTTCTGTTCCATGGTCCCCCCGGATGTGGTAAAACTCTGTTGGCTAAGGCAGTCGCGAAC
GAATGCCAAGCAAACTTCATCAGTGTCAAAGGTCCTGAATTGCTTACAATGTGGTTTGGA
GAAAGTGAAGCCAATGTCAGAGAACTTTTCGACAAGGCGCGCCAATCTGCACCTTGTATT
CTATTCTTCGACGAGTTAGACTCAATTGCTATTAAGAGAGGAAGTTCAGTAGGCGATGCT
GGTGGCGCTGCTGATAGAGTCTTGAATCAACTCCTAACCGAAATGGATGGAATGAATGCC
AAGAAAACCGTTTTCGTTATAGGTGCAACCAATCGGCCTGATATTCTTGATCCTGCACTT
TTAAGGCCCGGGCGCCTTGACCAATTGATATACATTCCTCTCCCTGATGAAGAATCAAGA
CACCAAATTTTTCGCGCATGCTTAAGAAAATCACCTGTTTCTAGCAAAGTAAACTTGAGA
CATCTAGCCAAGTTAACTGAAGGATACAGTGGAGCAGACATTACTGAAATATGTCAACGC
GCTTGCAAATACGCAATAAGGGGAGAAATCGAAAAGGATATTGAGAGGGAGAAGAAGAGA
ATGGAGAATCCTGATATAATGGAGGAAGATACTGAAGAAGAGGTTGCAGAAATTAAGGTT
GCACATTTTGAGGAATCAATGAAGTTTGCTAGGAGAAGTGTAAGTGATTTGGATATTTTA
AAATACCATGATTTTGCTCAGTCTTTGCAACAGTCAAGAGGCTTTGGTAGTGAATTTAAG
TTCACAAATAATAACACTACTGCTAATGCTGCTAAGGAAAATCCTTTTGAGAATTCTGTT
GGAGTTGAAGATTGTGATGCTGAGTTATATGATTAG

Peptide Sequence

PEP ID

XP_016432443.1
PEP Infomation

PREDICTED: cell division cycle protein 48 homolog [Nicotiana tabacum]
Sequence

MKGENKKQSFESKETKKDYTTAILERKKAPNRLIVDESTKDENSIVFLNPETMEKLQLFR
GDTVLIKGKRKRDTISTAEVDETCEESKIRMNKVVRNNLRIRLGDIASVHLCSNIQYGKR
VHVLPIDDTIEGLTGDLFEVYLKPYFTDSYRPLRKGDIFNVRGGMRSVEFKVVETDPPDY
CIVAPDTEIFIDGDPIRREDEERALDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKCI
GVKTPKGILLYGPPGSGKTTIARAVANETGAFFLVINGPEIMSKMAGESEANLRNAFVEA
EKNAPSIIFIDEVDSIAPNREKTNGEVERRIVSQLLTLMDGLKSRAHVVVMAATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEILRVHTKNMKLDEDVDLEMVAKDTHGHVGADLAA
LTTEAALQCIREKMDVIDMEDDTIDAEILNSMAVNNEHFKAALGTTNPSSLRETVVEVPN
VSWDDIGGLETVKRELQETVQYPVEHPELFEKFGMSASKGVLFHGPPGCGKTLLAKAVAN
ECQANFISVKGPELLTMWFGESEANVRELFDKARQSAPCILFFDELDSIAIKRGSSVGDA
GGAADRVLNQLLTEMDGMNAKKTVFVIGATNRPDILDPALLRPGRLDQLIYIPLPDEESR
HQIFRACLRKSPVSSKVNLRHLAKLTEGYSGADITEICQRACKYAIRGEIEKDIEREKKR
MENPDIMEEDTEEEVAEIKVAHFEESMKFARRSVSDLDILKYHDFAQSLQQSRGFGSEFK
FTNNNTTANAAKENPFENSVGVEDCDAELYD

Transcript Sequence

Gene sequence data has not been registered.